Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications

Min Su; Tao Pan; Qiu-Zhen Chen; Wei-Wei Zhou; Yi Gong; Gang Xu; Huan-Yu Yan; Si Li; Qiao-Zhen Shi; Ya Zhang; Xiao He; Chun-Jie Jiang; Shi-Cai Fan; Xia Li; Murray J. Cairns; Xi Wang; Yong-Sheng Li

doi:10.1186/s40779-022-00434-8

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Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications

REVIEW | Updated：2023-09-05

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- Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications
- Min Su , Tao Pan , Qiu-Zhen Chen , Wei-Wei Zhou , Yi Gong , Gang Xu , Huan-Yu Yan , Si Li , Qiao-Zhen Shi , Ya Zhang , Xiao He , Chun-Jie Jiang , Shi-Cai Fan , Xia Li , Murray J. Cairns , Xi Wang , Yong-Sheng Li
- Military Medical Research Vol. 10, Issue 4, Pages: 529-553(2023)
- Affiliations：
  1.State Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing 211166, China
  2.College of Biomedical Information and Engineering, the First Affiliated Hospital of Hainan Medical University, Hainan Medical University, Haikou 571199, China
  3.College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China
  4.Department of Immunology, Nanjing Medical University, Nanjing 211166, China
  5.Department of Laboratory Medicine, Women and Children’s Hospital of Chongqing Medical University, Chongqing 401174, China
  6.Baylor College of Medicine, Houston, TX 77030, USA
  7.Shenzhen Institute for Advanced Study, University of Electronic Science and Technology of China, Shenzhen 518110, Guangdong, China
  8.School of Biomedical Sciences and Pharmacy, Faculty of Health and Medicine, the University of Newcastle, University Drive, Callaghan, NSW 2308, Australia
  9.Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW 2305, Australia
- Author bio：
  * lixia@hrbmu.edu.cn;
  murray.cairns@newcastle.edu.au;
  xiwang@njmu.edu.cn;
  liyongsheng@hainmc.edu.cn
- Funds：
- DOI： 10.1186/s40779-022-00434-8
  CLC：
- Accepted：
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Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications

DOI： 10.1186/s40779-022-00434-8

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